BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D02SP1|AL424949
(254 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 460 e-130
>3x_Contig1619
Length = 7770
Score = 460 bits (224), Expect = e-130
Identities = 240/254 (94%)
Strand = Plus / Minus
Query: 1 accaaaatttgagtttggaatttgtttgttcgaatcaaaccggttcaatatawawmmmgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 6780 accaaaatttgagtttggaatttgtttgttcgaatcaaaccggttcaatatatatcccgg 6721
Query: 61 amgccattgtccgaccctttatgagggtcggacgaggcgtccggggaattttatataawa 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6720 acgccattgtccgaccctttatgagggtcggacgaggcgtccggggaattttatataata 6661
Query: 121 awawartwacgtctccttatttataagaagatataaccctggaggagagaatattgttta 180
| | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6660 atatagttacgtctccttatttataagaagatataaccctggaggagagaatattgttta 6601
Query: 181 atggtaaaamagttgccttttaagcatcccatgtttggttcgattccaactattcttata 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6600 atggtaaaacagttgccttttaagcatcccatgtttggttcgattccaactattcttata 6541
Query: 241 tatwaaatataaaa 254
||| | ||||||||
Sbjct: 6540 tattatatataaaa 6527
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1391
Number of Sequences: 1807
Number of extensions: 1391
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 254
length of database: 10,358,551
effective HSP length: 15
effective length of query: 239
effective length of database: 10,331,446
effective search space: 2469215594
effective search space used: 2469215594
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 48 (99.0 bits)